Included Properties
Data Type
Lab
Experiment Type
Dataset
Sample
Organ/System
Publication
Assay Details
Set Type
Warnings
12 Common Properties
Project
4DN
Experiment Category
Sequencing
Organism
Human
Sample Type
immortalized cells
Sample Tier
Tier 2
Sample Category
Tier 2
Tissue Source
colon
Modifications
No value
Treatments
No value
Center
NOFIC - Belmont
Status
Released
Commendations
Gold Biosample
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
TSA-seq
HCT116 (Tier 2)
TSA-seq Nucleolin in HCT116 cells
condition2 - conditionC - anti-Nucleolin
Target
NCL protein
TSA-seq
HCT116 (Tier 2)
TSA-seq Nucleolin in HCT116 cells
input - condition2 - conditionC - anti-Nucleolin
Target
NCL protein
TSA-seq
HCT116 (Tier 2)
TSA-seq DDX18 in HCT116 cells
condition2 - conditionC - anti-DDX18
Target
DDX18 protein
TSA-seq
HCT116 (Tier 2)
TSA-seq DDX18 in HCT116 cells
input - condition2 - conditionC - anti-DDX18
Target
DDX18 protein
TSA-seq
HCT116 (Tier 2)
TSA-seq CENPB in HCT116 cells
condition2 - conditionC or conditionE - anti-CENPB
Target
CENPB protein
TSA-seq
HCT116 (Tier 2)
TSA-seq CENPB in HCT116 cells
input - condition2 - conditionC or conditionE - anti-CENPB
Target
CENPB protein
TSA-seq
HCT116 (Tier 2)
TSA-seq POL1RE in HCT116 cells
condition2 - conditionC or conditionE- anti-POL1RE
Target
POLR1E protein
TSA-seq
HCT116 (Tier 2)
TSA-seq MKI67IP in HCT116 cells
condition2 - conditionC or conditionE - anti-MKI67IP
Target
NIFK protein
TSA-seq
HCT116 (Tier 2)
TSA-seq MKI67IP in HCT116 cells
input - condition2 - conditionC or conditionE - anti-MKI67IP
Target
NIFK protein
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P1-G1 baseline
Fraction
G1 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P02
Fraction
P2 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P03
Fraction
P3 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P04
Fraction
P4 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P05
Fraction
P5 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P06
Fraction
P6 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P07
Fraction
P7 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P08
Fraction
P8 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P09
Fraction
P9 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P10
Fraction
P10 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P11
Fraction
P11 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P12
Fraction
P12 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P13
Fraction
P13 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P14
Fraction
P14 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P15
Fraction
P15 of 17 fractions
Multi-stage Repli-seq
HCT116 (Tier 2)
16-fraction Repli-seq on HCT116
P16
Fraction
P16 of 17 fractions