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385 fewer sets in 4DN-only Data.

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  • ExperimentSetReplicate1872
    • Project
  • 4DN1872
    • Lab
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    Experiment Type
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    Organism
    Sample Type
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    Sample Category
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    Tissue Source
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    Set Type
  • Replicate1872
    • Status
    Commendations
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    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNES9BMCFUM
    DNA FISH
    U2OS
    DNA FISH in U2OS
    siTERRA
    Target
    Chromosomes, Telomere DNA (human)
    Huaiying Zhang, CMU
    4DNESBO1XK2L
    DNA FISH
    U2OS
    DNA FISH in U2OS
    siControl
    Target
    Chromosomes, Telomere DNA (human)
    Huaiying Zhang, CMU
    4DNESEXYI8T6
    RNA-seq
    KH2 ESC differentiated to stem cell
    RNA-seq on mouse stem cells
    Epiblast stem cells (EPISC)
    -
    Effie Apostolou, CORNELL
    4DNESGNRORMX
    RNA-seq
    extraembryonic cell
    RNA-seq on mouse stem cells
    Extra embryonic stem cells (XEN)
    -
    Effie Apostolou, CORNELL
    4DNES9KYIC7L
    RNA-seq
    trophoblast cell
    RNA-seq on mouse stem cells
    Trophoblast stem cells (TSC)
    -
    Effie Apostolou, CORNELL
    4DNESL7UB3NT
    RNA-seq
    mouse embryonic stem cell
    RNA-seq on mouse stem cells
    Embryonic stem cell (ESC)
    -
    Effie Apostolou, CORNELL
    4DNESH96MSWQ
    ChIP-exo
    extraembryonic cell
    ChIP-seq on mouse stem cells
    Extra embryonic stem cells (XEN) - CTCF antibody
    Target
    Ctcf mouse protein
    Effie Apostolou, CORNELL
    4DNESUX2C1HF
    ChIP-exo
    trophoblast cell
    ChIP-seq on mouse stem cells
    Trophoblast stem cells (TSC) - CTCF antibody
    Target
    Ctcf mouse protein
    Effie Apostolou, CORNELL
    4DNES8O75FFV
    ChIP-exo
    mouse embryonic stem cell
    ChIP-seq on mouse stem cells
    Embryonic stem cell (ESC) - CTCF antibody
    Target
    Ctcf mouse protein
    Effie Apostolou, CORNELL
    4DNESYO1PLH7
    ChIP-seq
    KH2 ESC differentiated to stem cell
    ChIP-seq on mouse stem cells
    Epiblast stem cells (EPISC) - control
    Target
    None (Control)
    Effie Apostolou, CORNELL
    4DNES8EIUXHX
    ChIP-seq
    KH2 ESC differentiated to stem cell
    ChIP-seq on mouse stem cells
    Epiblast stem cells (EPISC) - H3K27ac antibody
    Target
    H3K27ac (mouse)
    Effie Apostolou, CORNELL
    4DNESP9J7ZRT
    ChIP-seq
    extraembryonic cell
    ChIP-seq on mouse stem cells
    Extra embryonic stem cells (XEN) - control
    Target
    None (Control)
    Effie Apostolou, CORNELL
    4DNES9DRZEH3
    ChIP-seq
    extraembryonic cell
    ChIP-seq on mouse stem cells
    Extra embryonic stem cells (XEN) - H3K27ac antibody
    Target
    H3K27ac (mouse)
    Effie Apostolou, CORNELL
    4DNES31A969I
    ChIP-seq
    trophoblast cell
    ChIP-seq on mouse stem cells
    Trophoblast stem cells (TSC) - control
    Target
    None (Control)
    Effie Apostolou, CORNELL
    4DNES6GDW5XV
    ChIP-seq
    trophoblast cell
    ChIP-seq on mouse stem cells
    Trophoblast stem cells (TSC) - H3K27ac antibody
    Target
    H3K27ac (mouse)
    Effie Apostolou, CORNELL
    4DNESJ7QUMZD
    ChIP-seq
    mouse embryonic stem cell
    ChIP-seq on mouse stem cells
    Embryonic stem cell (ESC) - control
    Target
    None (Control)
    Effie Apostolou, CORNELL
    4DNESDVQP5XT
    ChIP-seq
    mouse embryonic stem cell
    ChIP-seq on mouse stem cells
    Embryonic stem cell (ESC) - H3K27ac antibody
    Target
    H3K27ac (mouse)
    Effie Apostolou, CORNELL
    4DNESONDPZV6
    HiChIP
    KH2 ESC differentiated to stem cell
    HiChIP on mouse stem cells
    Epiblast stem cells (EPISC)
    Target
    H3K27ac (mouse)
    Effie Apostolou, CORNELL
    4DNESJAG21WG
    HiChIP
    extraembryonic cell
    HiChIP on mouse stem cells
    Extra embryonic stem cells (XEN)
    Target
    H3K27ac (mouse)
    Effie Apostolou, CORNELL
    4DNESX8VOP7F
    HiChIP
    trophoblast cell
    HiChIP on mouse stem cells
    Trophoblast stem cells (TSC)
    Target
    H3K27ac (mouse)
    Effie Apostolou, CORNELL
    4DNESCE6QH8A
    in situ Hi-C
    extraembryonic cell
    Hi-C on mouse stem cells
    Extra embryonic stem cells (XEN)
    Enzyme
    Arima - A1, A2
    Effie Apostolou, CORNELL
    4DNESXWY8ILZ
    in situ Hi-C
    trophoblast cell
    Hi-C on mouse stem cells
    Trophoblast stem cells (TSC)
    Enzyme
    Arima - A1, A2
    Effie Apostolou, CORNELL
    4DNESL9NS1I9
    ATAC-seq
    KH2 ESC differentiated to stem cell
    ATAC-seq on mouse stem cells
    Epiblast stem cells (EPISC)
    -
    Effie Apostolou, CORNELL
    4DNESAYAR38K
    ATAC-seq
    extraembryonic cell
    ATAC-seq on mouse stem cells
    Extra embryonic stem cells (XEN)
    -
    Effie Apostolou, CORNELL
    4DNESSLLU2AB
    ATAC-seq
    trophoblast cell
    ATAC-seq on mouse stem cells
    Trophoblast stem cells (TSC)
    -
    Effie Apostolou, CORNELL