Data Browser
Filter & browse experiments

140 more sets available in External Data.
 

Properties

Dataset
Sample
Publication
Assay Details
1 Common Properties
 Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
RNA-seq
LMNA-R225X-het with mutant LMNA R225X point mutation differentiated to cardiac muscle cell
RNA-seq on lamin A/C haploinsufficient human induced pluripotent stem cell-derived cardiomyocytes
CRISPR corrected LMNA het R225X mutation to R225R - Clone 38
-
RNA-seq
LMNA-R225X-het with mutant LMNA R225X point mutation differentiated to cardiac muscle cell
RNA-seq on lamin A/C haploinsufficient human induced pluripotent stem cell-derived cardiomyocytes
CRISPR corrected LMNA het R225X mutation to R225R - Clone 15
-
RNA-seq
LMNA-R225X-het differentiated to cardiac muscle cell
RNA-seq on lamin A/C haploinsufficient human induced pluripotent stem cell-derived cardiomyocytes
Heterozygous LMNA nonsense mutation R225X
-
DNase Hi-C
LMNA-R225X-het with mutant LMNA R225X point mutation differentiated to cardiac muscle cell
DNase Hi-C on lamin A/C haploinsufficient human induced pluripotent stem cell-derived cardiomyocytes
CRISPR corrected LMNA het R225X mutation to R225R - Clone 38
Enzyme
DNaseI
DNase Hi-C
LMNA-R225X-het with mutant LMNA R225X point mutation differentiated to cardiac muscle cell
DNase Hi-C on lamin A/C haploinsufficient human induced pluripotent stem cell-derived cardiomyocytes
CRISPR corrected LMNA het R225X mutation to R225R - Clone 15
Enzyme
DNaseI
DNase Hi-C
LMNA-R225X-het differentiated to cardiac muscle cell
DNase Hi-C on lamin A/C haploinsufficient human induced pluripotent stem cell-derived cardiomyocytes
Heterozygous LMNA nonsense mutation R225X
Enzyme
DNaseI
Repli-seq
H1-hESC (Tier 1) differentiated to definitive endoderm
E/L repliseq on H1 derived definitive endoderm
late
Fraction
late fraction of 2 fractions
Repli-seq
H1-hESC (Tier 1) differentiated to definitive endoderm
E/L repliseq on H1 derived definitive endoderm
early
Fraction
early fraction of 2 fractions
Repli-seq
WTC-11 (Tier 1)
E/L repliseq on WTC-11
late
Fraction
late fraction of 2 fractions
Repli-seq
WTC-11 (Tier 1)
E/L repliseq on WTC-11
early
Fraction
early fraction of 2 fractions
MARGI
HFFc6 (Tier 1)
-
-
-
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:73778050-73945077, GRCh38:18:46316193-46486760, Chromosomes, GRCh38:18:22075002-22239510; GRCh38:18:22075002-22239510, Chromosomes, GRCh38:18:46316193-46486760, GRCh38:18:73778050-73945077; GRCh38:18:22075002-22239510, Chromosomes, GRCh38:18:73778050-73945077, GRCh38:18:46316193-46486760
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
Chromosomes, GRCh38:18:22075002-22239510, GRCh38:18:34992711-35151964, GRCh38:18:48016594-48189106; GRCh38:18:48016594-48189106, GRCh38:18:34992711-35151964, Chromosomes, GRCh38:18:22075002-22239510
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:46316193-46486760, GRCh38:18:62276743-62456847, GRCh38:18:73778050-73945077, Chromosomes; GRCh38:18:62276743-62456847, Chromosomes, GRCh38:18:73778050-73945077, GRCh38:18:46316193-46486760; GRCh38:18:46316193-46486760, Chromosomes, GRCh38:18:62276743-62456847, GRCh38:18:73778050-73945077
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
Chromosomes, GRCh38:18:34992711-35151964, GRCh38:18:62276743-62456847, GRCh38:18:40596626-40761745; Chromosomes, GRCh38:18:34992711-35151964, GRCh38:18:40596626-40761745, GRCh38:18:62276743-62456847; GRCh38:18:34992711-35151964, GRCh38:18:62276743-62456847, Chromosomes, GRCh38:18:40596626-40761745
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
Chromosomes, GRCh38:18:22075002-22239510, GRCh38:18:2535851-2706101, GRCh38:18:62276743-62456847; GRCh38:18:22075002-22239510, Chromosomes, GRCh38:18:62276743-62456847, GRCh38:18:2535851-2706101; GRCh38:18:62276743-62456847, Chromosomes, GRCh38:18:2535851-2706101, GRCh38:18:22075002-22239510
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:48016594-48189106, GRCh38:17:30541949-30739347, Chromosomes, GRCh38:18:75525179-75695249; GRCh38:18:48016594-48189106, GRCh38:17:30541949-30739347, GRCh38:18:75525179-75695249, Chromosomes; GRCh38:18:75525179-75695249, Chromosomes, GRCh38:18:48016594-48189106, GRCh38:17:30541949-30739347
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:46316193-46486760, Chromosomes, GRCh38:18:40596626-40761745, GRCh38:18:75525179-75695249; Chromosomes, GRCh38:18:40596626-40761745, GRCh38:18:46316193-46486760, GRCh38:18:75525179-75695249; GRCh38:18:75525179-75695249, Chromosomes, GRCh38:18:40596626-40761745, GRCh38:18:46316193-46486760
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:34992711-35151964, GRCh38:18:22075002-22239510, GRCh38:18:75525179-75695249, Chromosomes; GRCh38:18:75525179-75695249, GRCh38:18:22075002-22239510, GRCh38:18:34992711-35151964, Chromosomes; Chromosomes, GRCh38:18:22075002-22239510, GRCh38:18:75525179-75695249, GRCh38:18:34992711-35151964
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:75525179-75695249, GRCh38:18:62276743-62456847, Chromosomes, GRCh38:18:2535851-2706101
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:73778050-73945077, GRCh38:18:62276743-62456847, GRCh38:18:2535851-2706101, Chromosomes; Chromosomes, GRCh38:18:2535851-2706101, GRCh38:18:62276743-62456847, GRCh38:18:73778050-73945077
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:46316193-46486760, GRCh38:18:48016594-48189106, GRCh38:18:2535851-2706101, Chromosomes; Chromosomes, GRCh38:18:2535851-2706101, GRCh38:18:46316193-46486760, GRCh38:18:48016594-48189106; Chromosomes, GRCh38:18:46316193-46486760, GRCh38:18:2535851-2706101, GRCh38:18:48016594-48189106
DNA FISH
HFF-hTERT
DNA FISH on Chr18
-
Target
GRCh38:18:34992711-35151964, GRCh38:18:40596626-40761745, GRCh38:18:2535851-2706101, Chromosomes; Chromosomes, GRCh38:18:34992711-35151964, GRCh38:18:40596626-40761745, GRCh38:18:2535851-2706101
DNase Hi-C
WTC-11 (Tier 1) differentiated to cardiac muscle cell
WTC-11 differentiation to cardiomyocytes
cardiomyocytes
Enzyme
DNaseI
DNase Hi-C
WTC-11 (Tier 1) differentiated to primitive cardiac myocyte
WTC-11 differentiation to cardiomyocytes
cardiac progenitors
Enzyme
DNaseI