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113 more sets available in External Data.
 

Properties

Dataset
Assay Details
Title
Exp Type
Exps
Dataset
Condition
Organism
Sample
Assay Details
PLAC-seq
2
-
-
Mouse
F123-CASTx129 (Tier 2)
Target
Protein:CTCF_HUMAN
PLAC-seq
2
-
-
Mouse
F123-CASTx129 (Tier 2)
Target
Protein:H3K4me3
RNA-seq
2
RNA-seq on haploid H129-1s
-
Mouse
H129-1
-
RNA-seq
2
RNA-seq on diploid F1 2-1s
-
Mouse
F121-CASTx129
-
single cell Hi-C
1
single cell Hi-C on sorted haploid H129-1s
Non-sorted - 2i (external)
Mouse
H129-1
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted haploid H129-1s
2i
Mouse
H129-1
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted haploid H129-1s
G1/S - serum
Mouse
H129-1
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted diploid F1 2-1s
Non sorted - 2i medium
Mouse
F121-CASTx129
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted diploid F1 2-1s
Late-S/G2 - 2i medium
Mouse
F121-CASTx129
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted diploid F1 2-1s
Mid-S - 2i medium
Mouse
F121-CASTx129
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted diploid F1 2-1s
Early-S - 2i medium
Mouse
F121-CASTx129
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted diploid F1 2-1s
G1 - 2i medium
Mouse
F121-CASTx129
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted diploid F1 2-1s
2n DNA - 2i medium
Mouse
F121-CASTx129
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted diploid F1 2-1s
>2n DNA - serum
Mouse
F121-CASTx129
Enzyme
MboI
single cell Hi-C
1
single cell Hi-C on sorted diploid F1 2-1s
2n DNA - serum
Mouse
F121-CASTx129
Enzyme
MboI
RNA FISH
3
nascent transcript RNA FISH - JQ1 treatment
hnrnpl probe, +JQ1
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:7:28808541-28822266
RNA FISH
3
nascent transcript RNA FISH - JQ1 treatment
hnrnpl probe, control
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:7:28808541-28822266
RNA FISH
3
nascent transcript RNA FISH - JQ1 treatment
cdc34, slc4a1 probes, +JQ1
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:10:79682195-79688398, GRCm38:11:102348820-102365281
RNA FISH
3
nascent transcript RNA FISH - JQ1 treatment
cdc34, slc4a1 probes, control
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:10:79682195-79688398, GRCm38:11:102348820-102365281
RNA FISH
3
nascent transcript RNA FISH - JQ1 treatment
hbb-b1 probe, +JQ1
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:7:103826534-103827928
RNA FISH
3
nascent transcript RNA FISH - JQ1 treatment
hbb-b1 probe, control
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:7:103826534-103827928
RNA FISH
1
nascent transcript RNA FISH - JQ1 treatment
slc25a37 probe, +JQ1
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:14:69241851-69285103
RNA FISH
1
nascent transcript RNA FISH - JQ1 treatment
slc25a37 probe, control
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:14:69241851-69285103
RNA FISH
1
nascent transcript RNA FISH - JQ1 treatment
zfpm1, pabpc1 probes, +JQ1
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:8:122282141-122337247, GRCm38:15:36595658-36608973
RNA FISH
1
nascent transcript RNA FISH - JQ1 treatment
zfpm1, pabpc1 probes, control
Mouse
G1E-ER4 with GATA-1-ER insertion, GATA-1 disruption
Target
GRCm38:15:36595658-36608973, GRCm38:8:122282141-122337247